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Results from an EMSL Arrows Calculation

EMSL Arrows is a revolutionary approach to materials and chemical simulations that uses NWChem and chemical computational databases to make materials and chemical modeling accessible via a broad spectrum of digital communications including posts to web APIs, social networks, and traditional email.

Molecular modeling software has previously been extremely complex, making it prohibative to all but experts in the field, yet even experts can struggle to perform calculations. This service is designed to be used by experts and non-experts alike. Experts can carry out and keep track of large numbers of complex calculations with diverse levels of theories present in their workflows. Additionally, due to a streamlined and easy-to-use input, non-experts can carry out a wide variety of molecular modeling calculations previously not accessible to them.



Trajectory for freq id=75948 fnum=35  w(cm-1)= 994.64  - Generating xyzfile

JSmol: an open-source HTML5 viewer for chemical structures in 3D


Temperature= 298.15  freq(35)=  994.640 cm-1
  - contribution to thermal correction to enthalpy=    1.445 kcal/mol (  0.002302)
  - contribution to Entropy                       =    0.096 cal/mol-k

Frequencies:
 -0.000 -0.000 -0.000 0.000 0.000 0.000 68.930 102.600 109.480 126.880
 175.450 190.800 216.410 282.040 340.720 345.440 387.460 414.240 435.420 476.360
 479.930 528.770 560.230 624.980 636.870 689.830 723.210 747.150 799.940 812.740
 841.070 849.070 929.250 967.200 994.640 1083.520 1159.980 1165.770 1205.490 1257.910
 1265.840 1294.860 1322.540 1364.190 1385.690 1421.810 1446.600 1519.660 1537.000 1560.030
 1591.450 1669.970 3077.020 3175.810 3222.540 3814.590 3856.530

+---------------------------------+
| chemdb_freq - frequency program |
+---------------------------------+

mysql db        = TNT_Project
table name      = calculations
id              = 75948
fnum            = 35

iupac    = O=N(=O)C1=C[CH]C(=C([C@H]1O)N(=O)=O)O anion
mformula = C6H5N2O6
inchi    = InChI=1S/C6H5N2O6/c9-4-2-1-3(7(11)12)6(10)5(4)8(13)14/h1-2,6,9-10H/t6-/m0/s1
inchikey = DZEBBVDMCJNUSC-LURJTMIESA-N
esmiles  = O=N(=O)C1=C[CH]C(=C([C@H]1O)N(=O)=O)O theory{dft} xc{pbe0} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{-1}

calculation_type =  ovc
theory           =  dft
xc               =  pbe0
basis            =  6-311++G(2d,2p)
charge,mult      =  -1 1
energy           =    -791.767195 Hartrees
enthalpy correct.=       0.138369 Hartrees
entropy          =        106.072 cal/mol-K
solvation energy =        -61.626 kcal/mol  solvation_type = COSMO



Trajectory for freq id=75948 fnum=35  w(cm-1)= 994.64  - Generating xyzfile


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KEYWORDs - 
   reaction: :reaction
   chinese_room: :chinese_room
   molecule: :molecule
   nmr: :nmr
   predict: :predict
   submitesmiles: :submitesmiles
   nosubmitmissingesmiles
   resubmitmissingesmiles
   submitmachines: :submitmachines
   useallentries
   nomodelcorrect
   eigenvalues: :eigenvalues
   frequencies: :frequencies
   nwoutput: :nwoutput
   xyzfile: :xyzfile
   alleigs: :alleigs
   allfreqs: :allfreqs

   reactionenumerate:
      energytype:[erxn(gas) hrxn(gas) grxn(gas) delta_solvation grxn(aq)] :energytype
      energytype:[kcal/mol kj/mol ev cm-1 ry hartree au] :energytype
      tablereactions:
         reaction: ... :reaction
         reaction: ... :reaction
         ...
      :tablereactions
      tablemethods:
         method: ... :method
         method: ... :method
         ...
      :tablemethods
   :reactionenumerate


   rotatebonds
   xyzinput:
      label:  :label
      xyzdata:
       ... xyz data ...
      :xyzdata
   :xyzinput


   submitHf: :submitHf
   nmrexp: :nmrexp

   findreplace: old text | new text :findreplace

   listnwjobs
   fetchnwjob: :fetchnwjob
   pushnwjob: :pushnwjob

   printcsv: :printcsv
   printeig: :printeig
   printfreq: :printfreq
   printxyz: :printxyz
   printjobinfo: :printjobinfo
   printnwout: :printnwout
   badids: :badids
   hup_string: 
   database:
   table:
   request_table:
   listallesmiles
   queuecheck                              
This software service and its documentation were developed at the Environmental Molecular Sciences Laboratory (EMSL) at Pacific Northwest National Laboratory, a multiprogram national laboratory, operated for the U.S. Department of Energy by Battelle under Contract Number DE-AC05-76RL01830. Support for this work was provided by the Department of Energy Office of Biological and Environmental Research, and Department of Defense environmental science and technology program (SERDP). THE SOFTWARE SERVICE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE SERVICE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE SERVICE.